Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Pattern Specification Process (GO:0007389) Genes Targeted by hsa-mir-1257 in GCT Seminoma Korkola Cluster 89 Table contains all genes in the GCT Seminoma Korkola cluster number 89. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-1257 GO:0007389 80034 CSRNP3 cysteine-serine-rich nuclear protein 3 [Source:HGNC Symbol;Acc:30729] P T 7545 ZIC1 Zic family member 1 (odd-paired homolog, Drosophila) [Source:HGNC Symbol;Acc:12872] zzz999 Yes 155066 ATP6V0E2 ATPase, H+ transporting V0 subunit e2 [Source:HGNC Symbol;Acc:21723] T 4851 NOTCH1 notch 1 [Source:HGNC Symbol;Acc:7881] zzz999 Yes 6857 SYT1 synaptotagmin I [Source:HGNC Symbol;Acc:11509] T 6015 RING1 ring finger protein 1 [Source:HGNC Symbol;Acc:10018] T Yes 6496 SIX3 SIX homeobox 3 [Source:HGNC Symbol;Acc:10889] zzz999 Yes 79035 OBFC2B oligonucleotide/oligosaccharide-binding fold containing 2B [Source:HGNC Symbol;Acc:28412] zzz999 4133 MAP2 microtubule-associated protein 2 [Source:HGNC Symbol;Acc:6839] T 26050 SLITRK5 SLIT and NTRK-like family, member 5 [Source:HGNC Symbol;Acc:20295] zzz999 1641 DCX doublecortin [Source:HGNC Symbol;Acc:2714] T 3133 HLA-E major histocompatibility complex, class I, E [Source:HGNC Symbol;Acc:4962] zzz999 27147 DENND2A DENN/MADD domain containing 2A [Source:HGNC Symbol;Acc:22212] zzz999 9920 KBTBD11 kelch repeat and BTB (POZ) domain containing 11 [Source:HGNC Symbol;Acc:29104] T 3642 INSM1 insulinoma-associated 1 [Source:HGNC Symbol;Acc:6090] zzz999 9705 ST18 suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein) [Source:HGNC Symbol;Acc:18695] P T 80055 PGAP1 post-GPI attachment to proteins 1 [Source:HGNC Symbol;Acc:25712] T Yes 7101 NR2E1 nuclear receptor subfamily 2, group E, member 1 [Source:HGNC Symbol;Acc:7973] zzz999 7461 CLIP2 CAP-GLY domain containing linker protein 2 [Source:HGNC Symbol;Acc:2586] T 4760 NEUROD1 neurogenic differentiation 1 [Source:HGNC Symbol;Acc:7762] zzz999 Yes 57223 SMEK2 SMEK homolog 2, suppressor of mek1 (Dictyostelium) [Source:HGNC Symbol;Acc:29267] zzz999 22871 NLGN1 neuroligin 1 [Source:HGNC Symbol;Acc:14291] P T 1466 CSRP2 cysteine and glycine-rich protein 2 [Source:HGNC Symbol;Acc:2470] zzz999 3217 HOXB7 homeobox B7 [Source:HGNC Symbol;Acc:5118] zzz999 Yes 79570 NKAIN1 Na+/K+ transporting ATPase interacting 1 [Source:HGNC Symbol;Acc:25743] T 9256 BZRAP1 benzodiazapine receptor (peripheral) associated protein 1 [Source:HGNC Symbol;Acc:16831] zzz999 55885 LMO3 LIM domain only 3 (rhombotin-like 2) [Source:HGNC Symbol;Acc:6643] P T 429 ASCL1 achaete-scute complex homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:738] T Yes 9863 MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 [Source:HGNC Symbol;Acc:18957] zzz999 55079 FEZF2 FEZ family zinc finger 2 [Source:HGNC Symbol;Acc:13506] zzz999 2018 EMX2 empty spiracles homeobox 2 [Source:HGNC Symbol;Acc:3341] T Yes 56132 PCDHB3 protocadherin beta 3 [Source:HGNC Symbol;Acc:8688] zzz999 23098 SARM1 sterile alpha and TIR motif containing 1 [Source:HGNC Symbol;Acc:17074] zzz999 23208 SYT11 synaptotagmin XI [Source:HGNC Symbol;Acc:19239] zzz999 474343 SPIN2B spindlin family, member 2B [Source:HGNC Symbol;Acc:33147] zzz999 4807 NHLH1 nescient helix loop helix 1 [Source:HGNC Symbol;Acc:7817] zzz999 26953 RANBP6 RAN binding protein 6 [Source:HGNC Symbol;Acc:9851] zzz999 51147 ING4 inhibitor of growth family, member 4 [Source:HGNC Symbol;Acc:19423] zzz999 6664 SOX11 SRY (sex determining region Y)-box 11 [Source:HGNC Symbol;Acc:11191] zzz999 57711 ZNF529 zinc finger protein 529 [Source:HGNC Symbol;Acc:29328] zzz999 10481 HOXB13 homeobox B13 [Source:HGNC Symbol;Acc:5112] T 590 BCHE butyrylcholinesterase [Source:HGNC Symbol;Acc:983] zzz999 9627 SNCAIP synuclein, alpha interacting protein [Source:HGNC Symbol;Acc:11139] T 655 BMP7 bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:1074] zzz999 Yes 6656 SOX1 SRY (sex determining region Y)-box 1 [Source:HGNC Symbol;Acc:11189] T 4753 NELL2 NEL-like 2 (chicken) [Source:HGNC Symbol;Acc:7751] zzz999 5947 RBP1 retinol binding protein 1, cellular [Source:HGNC Symbol;Acc:9919] zzz999

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